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So its going to be time to upgrade my asus tinkerboard (similar but more powerful to a RPI for those who dont know...) to a "real" mini PC.

Something like an Intel NUC. Have not decided, looks like 2019 was a big year for those mini pc's and there are many options now.

I will no longer have a GPIO header to work with, so I will need to migrate over to a UZB.

Has anyone done this? Will a simple backup -> restore work?

Yes, I know I will need a license for z-way-server... Not a problem.

Thanks!

Do both backups in Expert UI (to be sure) and Smart Home UI (the main one). Restore in Smart Home UI and check mark to restore Network. And then update routes few times. Make sure to install all apps you installed from the store before doing the restore.